STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHG4Pleckstrin homology and RhoGEF domain containing G4. (1177 aa)    
Predicted Functional Partners:
LEKR1
Uncharacterized protein.
      
 0.798
KCTD19
Potassium channel tetramerization domain containing 19.
   
  
 0.760
LY6G6F
Uncharacterized protein.
      
 0.670
SLX4IP
SLX4 interacting protein.
      
 0.650
GNA14
G protein subunit alpha 14.
    
 0.645
GNAQ
G protein subunit alpha q.
    
 0.645
PLEKHG1
Pleckstrin homology and RhoGEF domain containing G1.
   
 
0.595
LRRC6
Leucine rich repeat containing 6.
     
 0.568
SNTB1
Syntrophin beta 1.
      
 0.568
CTPS1
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
      
 0.553
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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