STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO33F-box protein 33. (556 aa)    
Predicted Functional Partners:
WDR47
WD repeat domain 47.
   
  
 0.793
CUL1
Cullin 1; Belongs to the cullin family.
   
 
 0.743
CNOT6
CCR4-NOT transcription complex subunit 6.
   
  
 0.663
PACRG
Parkin coregulated.
      
 0.662
FAM49A
Family with sequence similarity 49 member A.
   
  
 0.628
LRFN5
Leucine rich repeat and fibronectin type III domain containing 5.
      
 0.624
GAL3ST3
Galactose-3-O-sulfotransferase 3.
      
 0.590
ARHGEF12
Rho guanine nucleotide exchange factor 12.
      
 0.574
TENT5A
Terminal nucleotidyltransferase 5A.
      
 0.553
DPF3
Double PHD fingers 3.
      
 0.538
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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