STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIP11Thyroid hormone receptor interactor 11. (1982 aa)    
Predicted Functional Partners:
IFT20
Intraflagellar transport 20.
   
 0.980
NHS
NHS actin remodeling regulator.
   
 0.738
USO1
USO1 vesicle transport factor.
   
 0.730
MIB1
Mindbomb E3 ubiquitin protein ligase 1.
    
 0.661
ENSOCUP00000028861
SERPIN domain-containing protein; Belongs to the serpin family.
   
 
 0.599
G1SN67_RABIT
SERPIN domain-containing protein; Belongs to the serpin family.
     
 0.595
ENSOCUP00000031431
SERPIN domain-containing protein; Belongs to the serpin family.
     
 0.595
LOC100358221
SERPIN domain-containing protein; Belongs to the serpin family.
     
 0.595
ENSOCUP00000036562
14_3_3 domain-containing protein.
    
 0.590
GOLGA5
Golgin A5.
   
  
 0.587
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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