STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEX264Testis expressed 264, ER-phagy receptor. (388 aa)    
Predicted Functional Partners:
CCPG1
Cell cycle progression 1.
   
  
 0.854
SEC62
SEC62 homolog, preprotein translocation factor.
      
 0.845
ATL3
Atlastin GTPase 3.
      
 0.841
GABARAP
Gamma-aminobutyric acid receptor-associated protein; Ubiquitin-like modifier that plays a role in intracellular transport of GABA(A) receptors and its interaction with the cytoskeleton. Involved in apoptosis. Involved in autophagy. Whereas LC3s are involved in elongation of the phagophore membrane, the GABARAP/GATE-16 subfamily is essential for a later stage in autophagosome maturation (By similarity); Belongs to the ATG8 family.
      
 0.782
RTN3
Reticulon.
      
 0.765
CALCOCO1
Calcium binding and coiled-coil domain 1.
      
 0.747
RETREG2
Reticulophagy regulator family member 2.
      
 0.707
TCP11
T-complex 11.
      
 0.613
TCTE1
T-complex-associated-testis-expressed 1.
   
 
 0.564
CATSPER2
Cation channel sperm associated 2.
      
 0.559
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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