STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100353293Uncharacterized protein. (321 aa)    
Predicted Functional Partners:
PCBP1
Poly(rC)-binding protein 1; Single-stranded nucleic acid binding protein that binds preferentially to oligo dC.
  
0.960
PCBP2
Poly(rC) binding protein 2.
  
  
0.900
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5'-terminal secondary structure and recruitment of mRNA to the ribosome.
    
 
 0.670
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 0.654
HNRNPL
Heterogeneous nuclear ribonucleoprotein L; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.622
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.621
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L like.
   
 0.598
HNRNPA1
Uncharacterized protein.
   
 0.592
PRPF8
Pre-mRNA processing factor 8.
   
   0.563
ZNF830
Zinc finger protein 830.
    
   0.552
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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