STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF121Ring finger protein 121. (331 aa)    
Predicted Functional Partners:
RNF185
Ring finger protein 185.
 
    
 0.818
ALKBH6
AlkB homolog 6.
   
  
 0.677
PHYKPL
5-phosphohydroxy-L-lysine phospho-lyase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
      
 0.649
RNFT1
Uncharacterized protein.
      
 0.620
RNF170
Ring finger protein 170.
   
  
 0.588
CGRRF1
Cell growth regulator with ring finger domain 1.
   
  
 0.580
WDR37
WD repeat domain 37.
   
  
 0.568
RNF145
Ring finger protein 145.
   
  
 0.566
VPS33B
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
    0.559
INPP5K
Inositol polyphosphate-5-phosphatase K.
   
  
 0.546
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.