STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100359295FAM194 domain-containing protein. (898 aa)    
Predicted Functional Partners:
MRPL40
Mitochondrial ribosomal protein L40.
   
   0.629
MRPL41
Mitochondrial ribosomal protein L41.
   
 
 0.620
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.562
MRPL55
Mitochondrial ribosomal protein L55.
   
 
 0.559
MRPL51
Mitochondrial ribosomal protein L51.
   
 
 0.556
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
   0.554
MRPL43
L51_S25_CI-B8 domain-containing protein.
    
   0.551
DAP3
Death associated protein 3.
   
 
 0.547
LOC100343402
Uncharacterized protein.
   
   0.542
TP53I13
Tumor protein p53 inducible protein 13.
   
 
 0.539
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.