STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTX4Deltex E3 ubiquitin ligase 4. (513 aa)    
Predicted Functional Partners:
NLRP4
NACHT domain-containing protein.
   
 0.942
NOTCH4
Uncharacterized protein.
   
 
 0.904
NOTCH2
Notch receptor 2.
   
 
 0.903
RNF19A
RBR-type E3 ubiquitin transferase.
      
 0.650
NLRP11
NLR family pyrin domain containing 11.
      
 0.650
RNF41
Ring finger protein 41.
   
  
 0.602
PPM1B
PPM-type phosphatase domain-containing protein.
   
  
 0.532
RNF11
Ring finger protein 11.
   
  
 0.530
TRIM38
Tripartite motif containing 38.
    
 0.504
TBK1
TANK binding kinase 1.
   
 0.473
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.