STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYTL1Uncharacterized protein. (195 aa)    
Predicted Functional Partners:
GOPC
PDZ domain-containing protein.
      
 0.578
CFAP100
Uncharacterized protein.
   
  
 0.525
CLEC3A
C-type lectin domain family 3 member A.
   
  
 0.500
PRELP
Proline and arginine rich end leucine rich repeat protein.
      
 0.461
ANKRD29
Ankyrin repeat domain 29.
      
 0.450
IBSP
Integrin binding sialoprotein.
      
 0.444
TNFRSF11B
Tumor necrosis factor receptor superfamily member 11B; Acts as decoy receptor for TNFSF11/RANKL and thereby neutralizes its function in osteoclastogenesis.
   
  
 0.442
PCOLCE2
Procollagen C-endopeptidase enhancer 2.
   
  
 0.431
UCMA
Upper zone of growth plate and cartilage matrix associated.
      
 0.429
SPTSSB
Serine palmitoyltransferase small subunit B.
      
 0.415
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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