STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOCUP00000040236Tubulin-specific chaperone A; Belongs to the TBCA family. (107 aa)    
Predicted Functional Partners:
CKAP5
Cytoskeleton associated protein 5.
      
 0.559
UBE2D4
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.540
TBCE
Uncharacterized protein.
    
 0.533
IL25
Interleukin 25.
      
 0.527
MAP4
Microtubule-associated protein.
      
 0.493
SPTA1
Spectrin alpha, erythrocytic 1.
      
 0.485
ARPC3
Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
  
 0.483
GNAI3
G protein subunit alpha i3.
      
 0.465
TUBB1
Tubulin beta 1 class VI; Belongs to the tubulin family.
   
 0.437
ENSOCUP00000046900
Tubulin domain-containing protein.
   
 0.435
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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