LCORL protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

LCORL

Uncharacterized protein. (1871 aa)

Predicted Functional Partners:

NCAPG

0.786

DCAF16

0.617

CHCHD7

0.608

PLAG1

0.575

FAM110B

0.566

VSIG10

0.546

ZNF652

0.542

FRMD3

0.525

UBXN2B

0.516

CTBP2

0.508

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHCHD7	FAM110B	ENSOCUP00000038170	ENSOCUP00000018159	Uncharacterized protein.	Family with sequence similarity 110 member B.	0.452
CHCHD7	LCORL	ENSOCUP00000038170	ENSOCUP00000040359	Uncharacterized protein.	Uncharacterized protein.	0.608
CHCHD7	PLAG1	ENSOCUP00000038170	ENSOCUP00000005193	Uncharacterized protein.	PLAG1 zinc finger.	0.726
CTBP2	LCORL	ENSOCUP00000038080	ENSOCUP00000040359	C-terminal binding protein 2.	Uncharacterized protein.	0.508
DCAF16	LCORL	ENSOCUP00000020370	ENSOCUP00000040359	DDB1 and CUL4 associated factor 16.	Uncharacterized protein.	0.617
DCAF16	NCAPG	ENSOCUP00000020370	ENSOCUP00000005876	DDB1 and CUL4 associated factor 16.	Non-SMC condensin I complex subunit G.	0.726
FAM110B	CHCHD7	ENSOCUP00000018159	ENSOCUP00000038170	Family with sequence similarity 110 member B.	Uncharacterized protein.	0.452
FAM110B	LCORL	ENSOCUP00000018159	ENSOCUP00000040359	Family with sequence similarity 110 member B.	Uncharacterized protein.	0.566
FAM110B	NCAPG	ENSOCUP00000018159	ENSOCUP00000005876	Family with sequence similarity 110 member B.	Non-SMC condensin I complex subunit G.	0.470
FAM110B	UBXN2B	ENSOCUP00000018159	ENSOCUP00000030391	Family with sequence similarity 110 member B.	UBX domain protein 2B.	0.727
FRMD3	LCORL	ENSOCUP00000034368	ENSOCUP00000040359	FERM domain containing 3.	Uncharacterized protein.	0.525
LCORL	CHCHD7	ENSOCUP00000040359	ENSOCUP00000038170	Uncharacterized protein.	Uncharacterized protein.	0.608
LCORL	CTBP2	ENSOCUP00000040359	ENSOCUP00000038080	Uncharacterized protein.	C-terminal binding protein 2.	0.508
LCORL	DCAF16	ENSOCUP00000040359	ENSOCUP00000020370	Uncharacterized protein.	DDB1 and CUL4 associated factor 16.	0.617
LCORL	FAM110B	ENSOCUP00000040359	ENSOCUP00000018159	Uncharacterized protein.	Family with sequence similarity 110 member B.	0.566
LCORL	FRMD3	ENSOCUP00000040359	ENSOCUP00000034368	Uncharacterized protein.	FERM domain containing 3.	0.525
LCORL	NCAPG	ENSOCUP00000040359	ENSOCUP00000005876	Uncharacterized protein.	Non-SMC condensin I complex subunit G.	0.786
LCORL	PLAG1	ENSOCUP00000040359	ENSOCUP00000005193	Uncharacterized protein.	PLAG1 zinc finger.	0.575
LCORL	UBXN2B	ENSOCUP00000040359	ENSOCUP00000030391	Uncharacterized protein.	UBX domain protein 2B.	0.516
LCORL	VSIG10	ENSOCUP00000040359	ENSOCUP00000007246	Uncharacterized protein.	V-set and immunoglobulin domain containing 10.	0.546