STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RGP1RGP1 homolog, RAB6A GEF complex partner 1. (396 aa)    
Predicted Functional Partners:
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
   
 0.993
COG8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.766
VPS53
VPS53 subunit of GARP complex.
   
 
 0.760
VPS52
VPS52 subunit of GARP complex.
   
 
 0.756
VPS54
VPS54 subunit of GARP complex.
     
 0.745
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.732
RAB6B
RAB6B, member RAS oncogene family.
    
 0.730
RAB6A
RAB6A, member RAS oncogene family.
    
 0.730
VPS51
VPS51 subunit of GARP complex.
   
 
 0.702
STX16-NPEPL1
STX16-NPEPL1 readthrough (NMD candidate); Belongs to the syntaxin family.
    
 0.687
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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