STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOCUP00000042790Uncharacterized protein. (140 aa)    
Predicted Functional Partners:
G1TLA8_RABIT
tRNA-synt_1e domain-containing protein.
 
   
  0.930
YARS1
Tyrosine--tRNA ligase.
  
 
 0.905
CARS2
Uncharacterized protein.
     
  0.900
GARS1
Glycyl-tRNA synthetase.
  
 
 0.818
LARS1
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.814
EPRS1
Glutamyl-prolyl-tRNA synthetase.
  
  
 0.812
NARS2
Asparaginyl-tRNA synthetase 2, mitochondrial.
  
  
 0.782
ENSOCUP00000027896
Uncharacterized protein; Belongs to the GST superfamily.
   
 0.777
EEF1G
Elongation factor 1-gamma; Probably plays a role in anchoring the complex to other cellular components.
   
 0.777
LARS2
Leucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.776
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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