STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYAP1Synapse associated protein 1. (370 aa)    
Predicted Functional Partners:
PIN1
Peptidyl-prolyl cis-trans isomerase.
    
   0.553
SYT11
Synaptotagmin 11.
      
 0.545
RPH3A
Rabphilin 3A.
      
 0.532
CBLN1
Cerebellin 1 precursor.
      
 0.506
NOC4L
Nucleolar complex associated 4 homolog.
      
 0.491
SV2A
Synaptic vesicle glycoprotein 2A.
      
 0.465
STX1B
Syntaxin 1B; Belongs to the syntaxin family.
      
 0.449
EIF2S3
Eukaryotic translation initiation factor 2 subunit 3; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyz [...]
   
  
 0.438
SLC32A1
Solute carrier family 32 member 1.
      
 0.424
NFATC2IP
Nuclear factor of activated T cells 2 interacting protein.
   
  
 0.411
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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