STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMAT4Zinc finger matrin-type 4. (287 aa)    
Predicted Functional Partners:
HECW1
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1.
   
 
 0.579
EEPD1
Endonuclease/exonuclease/phosphatase family domain containing 1.
      
 0.549
GTF3A
General transcription factor IIIA.
      
 0.543
TUBD1
Tubulin delta 1; Belongs to the tubulin family.
      
 0.540
TM2D2
TM2 domain containing 2.
      
 0.495
FAM110A
Family with sequence similarity 110 member A.
      
 0.493
PLEKHA2
Pleckstrin homology domain containing A2.
   
  
 0.490
ANKRD6
Ankyrin repeat domain 6.
   
  
 0.486
P3H2
Prolyl 3-hydroxylase 2.
      
 0.459
CREB5
cAMP responsive element binding protein 5.
      
 0.449
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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