STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPB41L1Erythrocyte membrane protein band 4.1 like 1. (947 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.949
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
   
 0.807
CNBD2
Cyclic nucleotide binding domain containing 2.
 
 
  
 0.803
NIPSNAP3A
Nipsnap homolog 3A.
      
 0.697
FAM49B
Family with sequence similarity 49 member B.
      
 0.643
DLG3
Discs large MAGUK scaffold protein 3; Belongs to the MAGUK family.
   
 0.631
GRIPAP1
GRIP1 associated protein 1.
   
  
 0.618
SMAGP
Small cell adhesion glycoprotein.
      
 0.597
EPB41L2
Erythrocyte membrane protein band 4.1 like 2.
   
0.597
FSCN1
Uncharacterized protein.
     
 0.565
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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