STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOCUP00000048211Uncharacterized protein. (2099 aa)    
Predicted Functional Partners:
ITGB4
Integrin beta.
   
 0.941
ENSOCUP00000047104
Calponin-homology (CH) domain-containing protein.
 
      0.900
JUP
Junction plakoglobin.
   
 0.722
COL17A1
Collagen type XVII alpha 1 chain.
   
 0.674
DSG3
Uncharacterized protein.
   
 0.646
DST
Dystonin.
 
   
 0.629
MACF1
Microtubule actin crosslinking factor 1.
     
0.629
ITSN2
Intersectin 2.
    
 0.566
NCK2
Cytoplasmic protein.
    
 0.564
SPTAN1
Spectrin alpha, non-erythrocytic 1.
   
 0.551
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (18%) [HD]