Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARTN | GDNF | ENSOCUP00000019801 | ENSOCUP00000002636 | Artemin. | Glial cell derived neurotrophic factor. | 0.500 |
ARTN | GFRA3 | ENSOCUP00000019801 | ENSOCUP00000048884 | Artemin. | GDNF family receptor alpha 3. | 0.963 |
ARTN | PSPN | ENSOCUP00000019801 | ENSOCUP00000005974 | Artemin. | Persephin. | 0.418 |
ARTN | RET | ENSOCUP00000019801 | ENSOCUP00000035713 | Artemin. | Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. | 0.961 |
FGFR1 | FGFR2 | ENSOCUP00000041826 | ENSOCUP00000034244 | Fibroblast growth factor receptor. | Fibroblast growth factor receptor. | 0.943 |
FGFR1 | FGFR4 | ENSOCUP00000041826 | ENSOCUP00000038483 | Fibroblast growth factor receptor. | Fibroblast growth factor receptor. | 0.977 |
FGFR1 | GDNF | ENSOCUP00000041826 | ENSOCUP00000002636 | Fibroblast growth factor receptor. | Glial cell derived neurotrophic factor. | 0.609 |
FGFR1 | GFRA3 | ENSOCUP00000041826 | ENSOCUP00000048884 | Fibroblast growth factor receptor. | GDNF family receptor alpha 3. | 0.562 |
FGFR2 | FGFR1 | ENSOCUP00000034244 | ENSOCUP00000041826 | Fibroblast growth factor receptor. | Fibroblast growth factor receptor. | 0.943 |
FGFR2 | FGFR4 | ENSOCUP00000034244 | ENSOCUP00000038483 | Fibroblast growth factor receptor. | Fibroblast growth factor receptor. | 0.948 |
FGFR2 | GDNF | ENSOCUP00000034244 | ENSOCUP00000002636 | Fibroblast growth factor receptor. | Glial cell derived neurotrophic factor. | 0.499 |
FGFR2 | GFRA3 | ENSOCUP00000034244 | ENSOCUP00000048884 | Fibroblast growth factor receptor. | GDNF family receptor alpha 3. | 0.562 |
FGFR4 | FGFR1 | ENSOCUP00000038483 | ENSOCUP00000041826 | Fibroblast growth factor receptor. | Fibroblast growth factor receptor. | 0.977 |
FGFR4 | FGFR2 | ENSOCUP00000038483 | ENSOCUP00000034244 | Fibroblast growth factor receptor. | Fibroblast growth factor receptor. | 0.948 |
FGFR4 | GFRA3 | ENSOCUP00000038483 | ENSOCUP00000048884 | Fibroblast growth factor receptor. | GDNF family receptor alpha 3. | 0.562 |
GDNF | ARTN | ENSOCUP00000002636 | ENSOCUP00000019801 | Glial cell derived neurotrophic factor. | Artemin. | 0.500 |
GDNF | FGFR1 | ENSOCUP00000002636 | ENSOCUP00000041826 | Glial cell derived neurotrophic factor. | Fibroblast growth factor receptor. | 0.609 |
GDNF | FGFR2 | ENSOCUP00000002636 | ENSOCUP00000034244 | Glial cell derived neurotrophic factor. | Fibroblast growth factor receptor. | 0.499 |
GDNF | GFRA3 | ENSOCUP00000002636 | ENSOCUP00000048884 | Glial cell derived neurotrophic factor. | GDNF family receptor alpha 3. | 0.890 |
GDNF | PSPN | ENSOCUP00000002636 | ENSOCUP00000005974 | Glial cell derived neurotrophic factor. | Persephin. | 0.649 |
page 1 of 3