STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSDC1BSD domain containing 1. (486 aa)    
Predicted Functional Partners:
SDC1
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
      
 0.653
HPSE
Heparanase.
      
 0.637
ARL2BP
ADP ribosylation factor like GTPase 2 binding protein.
      
 0.489
VGLL4
Vestigial like family member 4.
      
 0.419
G1SFV8_RABIT
Uncharacterized protein; Belongs to the BI1 family.
   
    0.418
LOC100338096
Uncharacterized protein; Belongs to the BI1 family.
   
    0.418
G1U6M2_RABIT
Uncharacterized protein; Belongs to the BI1 family.
   
    0.418
POLR3D
RNA polymerase III subunit D.
      
 0.410
PPIG
Peptidylprolyl isomerase G.
      
 0.409
HSDL2
Hydroxysteroid dehydrogenase like 2.
    
 
 0.400
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.