STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIF1BYip1 interacting factor homolog B, membrane trafficking protein. (433 aa)    
Predicted Functional Partners:
RABAC1
PRA1 family protein.
   
 
 0.816
YIPF4
Protein YIPF.
   
 
 0.788
YIPF7
Protein YIPF.
   
 
 0.785
SELENOS
Uncharacterized protein.
   
 
 0.785
YIPF5
Protein YIPF.
   
 
 0.785
SPRYD4
SPRY domain containing 4.
   
  
 0.705
ZFAND6
Zinc finger AN1-type containing 6.
      
 0.699
DPY19L4
Dpy-19 like 4.
      
 0.698
RAB1A
RAB1A, member RAS oncogene family.
   
 
 0.650
RETREG2
Reticulophagy regulator family member 2.
      
 0.649
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.