Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BVL6_TETNGParvalbumin 9; Belongs to the parvalbumin family. (109 aa)    
Predicted Functional Partners:
H3C3F0_TETNG
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.498
H3DAM6_TETNG
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.477
H3D5K7_TETNG
WD repeat domain 90.
   
 0.456
H3D3W8_TETNG
Uncharacterized protein.
    
 
 0.443
H3D3W9_TETNG
Uncharacterized protein.
    
 
 0.443
H3DMZ5_TETNG
Myosin, light chain 9a, regulatory.
   
 0.428
H3CQ70_TETNG
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.416
H3CSC1_TETNG
Myosin, light polypeptide 3, skeletal muscle.
   
 
 0.411
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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