Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BVM1_TETNGIF rod domain-containing protein; Belongs to the intermediate filament family. (150 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.673
H3BW56_TETNG
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.545
H3CRF0_TETNG
INO80 complex subunit E.
   
 0.543
H3DQN3_TETNG
Uncharacterized protein.
  
 
 0.449
H3CK57_TETNG
Eukaryotic translation elongation factor 1 gamma.
    
 0.437
H3D943_TETNG
Cleavage and polyadenylation specific factor 1.
    
  0.426
H3D7U8_TETNG
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.425
H3C6V8_TETNG
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
 0.402
H3CJL2_TETNG
Keratin 8; Belongs to the intermediate filament family.
   
 0.402
H3CP14_TETNG
Keratin 4; Belongs to the intermediate filament family.
   
 0.402
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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