Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BVM5_TETNGE2F_TDP domain-containing protein. (403 aa)    
Predicted Functional Partners:
H3C722_TETNG
Retinoblastoma-like 1 (p107).
   
 0.959
H3D8Q3_TETNG
Transcription factor.
   
 0.958
H3DG38_TETNG
Lin-9 DREAM MuvB core complex component.
    
 0.943
H3DM97_TETNG
Lin-37 DREAM MuvB core complex component.
    
 0.922
H3D2K0_TETNG
Retinoblastoma 1.
   
 0.912
H3D7K0_TETNG
Lin-54 DREAM MuvB core complex component.
    
 0.909
lin52
Protein lin-52 homolog.
    
 0.768
H3CX28_TETNG
Cyclin A1; Belongs to the cyclin family.
   
 0.739
H3D687_TETNG
Cyclin A2; Belongs to the cyclin family.
   
 0.739
H3C515_TETNG
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
    
 0.698
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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