Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BVN2_TETNGUncharacterized protein. (213 aa)    
Predicted Functional Partners:
H3CD24_TETNG
Apolipoprotein A-IV a.
      
 0.570
H3CUT1_TETNG
Uncharacterized protein.
      
 0.560
H3CLP6_TETNG
Apolipoprotein A-IV b, tandem duplicate 2.
      
 0.558
Q4SFM0_TETNG
Chromosome 7 SCAF14601, whole genome shotgun sequence; Belongs to the calycin superfamily. Lipocalin family.
      
 0.499
H3CRS6_TETNG
Prostaglandin D2 synthase b, tandem duplicate 1; Belongs to the calycin superfamily. Lipocalin family.
      
 0.498
Q4RI68_TETNG
Chromosome 8 SCAF15044, whole genome shotgun sequence.
  
     0.441
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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