Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BVN8_TETNGUncharacterized protein. (207 aa)    
Predicted Functional Partners:
H3CLP6_TETNG
Apolipoprotein A-IV b, tandem duplicate 2.
  
 0.990
SNCA
Synuclein alpha; Belongs to the synuclein family.
    
 0.982
APP
Amyloid beta precursor protein.
    
 0.975
H3D8S6_TETNG
Amyloid beta (A4) precursor protein b.
    
 0.975
H3C1N3_TETNG
Uncharacterized protein.
   
 0.927
H3CIW1_TETNG
DUF1943 domain-containing protein.
   
 0.927
H3D442_TETNG
Vitellogenin domain-containing protein.
   
 0.927
H3D443_TETNG
Vitellogenin domain-containing protein.
   
 0.927
H3DA53_TETNG
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 0.926
H3DA29_TETNG
Apolipoprotein A-Ib.
   
 
 0.905
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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