Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BVR4_TETNGLeucine rich repeat containing 20. (170 aa)    
Predicted Functional Partners:
H3CF73_TETNG
Ankyrin repeat and SOCS box containing 16.
   
 0.762
H3CFS1_TETNG
Ankyrin repeat and SOCS box-containing 12a.
   
 0.719
H3CUW2_TETNG
Leucine rich repeat containing 14B.
      
 0.686
H3CXL4_TETNG
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.680
H3C0X9_TETNG
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.677
H3CHH9_TETNG
Uncharacterized protein.
  
   
0.656
LRRC30
Leucine rich repeat containing 30.
  
   
0.656
H3CKP8_TETNG
Transmembrane protein 38A.
   
 
 0.642
H3DCC0_TETNG
Ankyrin repeat and SOCS box containing 8.
    
 0.635
H3CSB7_TETNG
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.629
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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