Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3BVT0_TETNGUSP domain-containing protein; Belongs to the peptidase C19 family. (206 aa)    
Predicted Functional Partners:
H3CNR2_TETNG
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.758
H3CQF1_TETNG
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.756
H3D363_TETNG
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.751
H3D075_TETNG
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.708
Q4RGY9_TETNG
Chromosome undetermined SCAF15083, whole genome shotgun sequence.
    
 0.677
H3DK30_TETNG
Transcriptional adaptor 2B.
    
 0.665
Q4SF14_TETNG
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.649
H3CWV9_TETNG
SPT3 homolog, SAGA and STAGA complex component.
    
 0.645
H3DFM6_TETNG
Transcriptional adapter.
    
 0.639
H3CJG5_TETNG
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.638
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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