Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BVT7_TETNGTetraspanin. (230 aa)    
Predicted Functional Partners:
H3DK82_TETNG
Sorting nexin 13.
    
   0.780
H3D4P4_TETNG
Tetraspanin.
    
 
 0.692
H3DAJ4_TETNG
Uncharacterized protein.
    
 
 0.678
H3BXE1_TETNG
FA core complex associated protein 24.
    
   0.629
Q4SBM1_TETNG
Chromosome 15 SCAF14667, whole genome shotgun sequence.
     
 0.577
H3DCD4_TETNG
DNA cross-link repair 1B.
      
 0.567
H3DF74_TETNG
Solute carrier family 25 member 22a; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.543
H3D5G8_TETNG
Motor neuron and pancreas homeobox 1.
      
 0.541
H3CSH9_TETNG
Tetraspanin.
    
 
 0.519
Q4SAH7_TETNG
Tetraspanin.
    
 
 0.519
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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