STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3BVU1_TETNGAcyl-CoA synthetase short chain family member 2. (684 aa)    
Predicted Functional Partners:
Q4T6G9_TETNG
Chromosome undetermined SCAF8763, whole genome shotgun sequence.
  
 0.979
H3C6B1_TETNG
Hydroxysteroid dehydrogenase like 2.
  
 
 0.928
cs
Citrate synthase, mitochondrial.
  
 0.911
H3D3L1_TETNG
NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.
   
 0.734
H3CF37_TETNG
Myocardin related transcription factor Ab.
  
 
 0.716
H3CH45_TETNG
Alcohol dehydrogenase iron containing 1.
  
 
 0.711
H3DH09_TETNG
Hydroxysteroid (17-beta) dehydrogenase 4.
  
 
 0.704
H3CZV1_TETNG
Enoyl CoA hydratase domain containing 2.
  
 
 0.693
H3CVH9_TETNG
Sorbitol dehydrogenase.
   
 
 0.669
H3D0J3_TETNG
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
  
 
 0.654
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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