STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3BXD6_TETNGUncharacterized protein. (698 aa)    
Predicted Functional Partners:
H3D521_TETNG
ATP synthase subunit gamma.
   
 
 0.821
H3D0G4_TETNG
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
  
 0.774
Q4TBS0_TETNG
Chromosome 21 SCAF7098, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL5 family.
  
  
 0.773
Q4SZY2_TETNG
Chromosome undetermined SCAF10102, whole genome shotgun sequence; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
  
  
 0.773
RPS3
KH type-2 domain-containing protein.
  
  
 0.773
H3D928_TETNG
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.773
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
  
  
 0.771
H3CBA4_TETNG
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
  
 0.769
H3D293_TETNG
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
  
 0.767
H3CU49_TETNG
ATP synthase peripheral stalk subunit OSCP.
   
 
 0.762
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.