Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BYD7_TETNGMitochondrial ribosomal protein S31. (320 aa)    
Predicted Functional Partners:
H3C3T9_TETNG
Mitochondrial ribosomal protein S7.
   
 0.999
H3CCS7_TETNG
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 0.999
Q4S788_TETNG
Chromosome undetermined SCAF14718, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family.
    
 0.999
H3D4S1_TETNG
Aurora kinase A interacting protein 1.
   
 0.999
H3D7S2_TETNG
Mitochondrial ribosomal protein S24.
    
 0.999
Q4RJV4_TETNG
Chromosome 9 SCAF15033, whole genome shotgun sequence.
   
 0.999
H3DLT3_TETNG
Death associated protein 3.
   
 0.999
H3BZ86_TETNG
Mitochondrial ribosomal protein S26.
   
  0.998
H3CCM7_TETNG
Mitochondrial ribosomal protein S35.
   
  0.998
MRPS12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 0.998
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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