STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3BYE3_TETNGCadherin EGF LAG seven-pass G-type receptor 1a; Belongs to the G-protein coupled receptor 2 family. (2725 aa)    
Predicted Functional Partners:
VANGL1
Vang-like protein.
    
 0.585
PRICKLE1
Prickle homolog 1a.
   
 0.538
H3CS14_TETNG
Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.462
H3D0N6_TETNG
Prickle homolog 2b.
   
 0.449
H3DKM4_TETNG
Prickle homolog 2a.
   
 0.448
H3DMC7_TETNG
Uncharacterized protein.
   
 0.448
H3CG66_TETNG
Vang-like protein.
    
 0.440
VANGL2
Vang-like protein.
    
 0.440
H3CPQ8_TETNG
Uncharacterized protein.
    
 0.440
H3CP72_TETNG
Ankyrin repeat domain 6b.
    
 0.405
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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