Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3BYE8_TETNGSi:ch211-107m4.1. (576 aa)    
Predicted Functional Partners:
H3BZN4_TETNG
Heterogeneous nuclear ribonucleoprotein K.
   
 0.692
H3CQ29_TETNG
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.692
H3C1F2_TETNG
Heterogeneous nuclear ribonucleoprotein L.
   
 0.642
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L like.
   
 0.642
H3DDK8_TETNG
Heterogeneous nuclear ribonucleoprotein M.
   
 0.614
H3CKN0_TETNG
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
  0.567
H3D509_TETNG
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
  0.515
H3C2H6_TETNG
RRM domain-containing protein.
   
 0.506
HNRNPH1
Heterogeneous nuclear ribonucleoprotein H1.
   
 0.506
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
   
 0.506
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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