STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
METAP2Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. (466 aa)    
Predicted Functional Partners:
H3CBB3_TETNG
Ribosomal protein L35.
  
 
 0.944
RPS3
KH type-2 domain-containing protein.
  
 
 0.932
H3D928_TETNG
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.929
H3CBA4_TETNG
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.916
H3D293_TETNG
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.916
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
  
   0.908
H3D7E8_TETNG
Mitochondrial ribosomal protein S2.
  
 
 0.899
Q4SN82_TETNG
Chromosome 8 SCAF14543, whole genome shotgun sequence.
  
 
 0.893
Q4TBS0_TETNG
Chromosome 21 SCAF7098, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.878
H3D075_TETNG
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.875
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.