Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3BYH0_TETNGSi:dkey-119f1.1. (1092 aa)    
Predicted Functional Partners:
H3BXK0_TETNG
NSE1 homolog, SMC5-SMC6 complex component.
    
 0.999
H3DGT5_TETNG
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.999
H3DP52_TETNG
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.999
Q4ST53_TETNG
Chromosome undetermined SCAF14300, whole genome shotgun sequence.
   
 0.998
H3DCC8_TETNG
Structural maintenance of chromosomes 5.
   
0.998
H3CZ11_TETNG
Structural maintenance of chromosomes protein.
   
 0.952
H3C3C3_TETNG
Uncharacterized protein.
   
 0.951
H3DPE0_TETNG
DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]
   
 
 0.944
H3CIW7_TETNG
MUS81 structure-specific endonuclease subunit.
    
 
 0.943
Q4RL90_TETNG
Chromosome 21 SCAF15022, whole genome shotgun sequence.
    
 
 0.915
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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