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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3BYH8_TETNGTumor necrosis factor receptor superfamily, member a. (428 aa)    
Predicted Functional Partners:
H3BZ00_TETNG
Caspase 10, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
    
 0.859
H3CR38_TETNG
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.859
H3C6S5_TETNG
Tnfrsf1a-associated via death domain.
  
 
 0.851
H3C779_TETNG
Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family.
    
 0.845
H3CE94_TETNG
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 0.837
H3DGB3_TETNG
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.824
H3BYV9_TETNG
Uncharacterized protein.
    
 0.791
Q4SJK5_TETNG
Chromosome 4 SCAF14575, whole genome shotgun sequence.
    
 0.589
H3CZ24_TETNG
TNF receptor-associated factor.
    
 0.589
H3D7H0_TETNG
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.589
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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