Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BYI4_TETNGUncharacterized protein. (1679 aa)    
Predicted Functional Partners:
lin52
Protein lin-52 homolog.
    
 0.693
H3D7K0_TETNG
Lin-54 DREAM MuvB core complex component.
    
 0.680
H3DIS1_TETNG
Uncharacterized protein.
    
 0.668
H3DG38_TETNG
Lin-9 DREAM MuvB core complex component.
    
 0.598
H3CWJ3_TETNG
GLIS family zinc finger 2b.
    
 0.580
RBBP7
Chromosome undetermined SCAF7762, whole genome shotgun sequence.
    
 0.543
H3DJC1_TETNG
Retinoblastoma binding protein 4.
    
 0.543
H3C722_TETNG
Retinoblastoma-like 1 (p107).
    
 0.537
H3DN52_TETNG
Uncharacterized protein.
      
 0.509
H3C0J6_TETNG
Carboxypeptidase A1 (pancreatic).
    
 
 0.508
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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