Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BYL3_TETNGPeroxidasin. (1440 aa)    
Predicted Functional Partners:
H3CRI0_TETNG
Glyceraldehyde-3-phosphate dehydrogenase.
      
 0.946
Q4RFF3_TETNG
Glyceraldehyde-3-phosphate dehydrogenase.
      
 0.942
H3CF63_TETNG
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
      
 0.894
H3DD39_TETNG
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
      
 0.858
H3CPB0_TETNG
Interleukin 10.
      
 0.847
H3D1Y5_TETNG
Beclin 1, autophagy related.
      
 0.820
H3D7N8_TETNG
Occludin a.
      
 0.806
H3DP13_TETNG
Myelin basic protein b.
      
 0.804
H3D624_TETNG
IF rod domain-containing protein; Belongs to the intermediate filament family.
      
 0.778
H3DC30_TETNG
Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.
      
 0.775
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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