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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3BYN6_TETNGWD_REPEATS_REGION domain-containing protein. (325 aa)    
Predicted Functional Partners:
H3CVV4_TETNG
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.981
Q4SF14_TETNG
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
  0.957
H3CQF1_TETNG
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.950
H3CIY3_TETNG
Baculoviral IAP repeat containing 6.
   
 0.945
H3CIY4_TETNG
Baculoviral IAP repeat containing 6.
   
 0.945
H3D363_TETNG
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.944
H3CJG5_TETNG
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.942
Q4SCJ6_TETNG
Chromosome undetermined SCAF14653, whole genome shotgun sequence.
   
 0.937
POLR2E
Chromosome 1 SCAF14751, whole genome shotgun sequence.
   
 0.935
H3BW56_TETNG
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.934
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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