Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BYP9_TETNGUncharacterized protein; Belongs to the tropomyosin family. (293 aa)    
Predicted Functional Partners:
H3BYR2_TETNG
Troponin T type 2a (cardiac).
   
 0.956
H3D543_TETNG
Troponin T2c, cardiac.
   
 0.956
Q4SVI8_TETNG
Chromosome 18 SCAF13757, whole genome shotgun sequence; Belongs to the actin family.
   
 0.927
ACTA1
Chromosome 14 SCAF14723, whole genome shotgun sequence; Belongs to the actin family.
   
 0.927
ACTC1
Zgc:86709.
   
 0.927
ACTA1-2
Actin alpha 1, skeletal muscle.
   
 0.927
TPM1
Uncharacterized protein; Belongs to the tropomyosin family.
  
  
 
0.900
H3C0B4_TETNG
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.782
H3DC43_TETNG
Troponin I type 1a (skeletal, slow).
   
 0.621
H3C5N5_TETNG
Troponin I4b, tandem duplicate 2.
   
 0.586
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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