Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BYQ1_TETNGUncharacterized protein. (482 aa)    
Predicted Functional Partners:
H3CPS4_TETNG
Mitochondrial translational release factor 1-like.
      
 0.841
Q4RSR4_TETNG
Chromosome 12 SCAF14999, whole genome shotgun sequence.
    
   0.759
H3C5W4_TETNG
Insulin-like growth factor binding protein, acid labile subunit.
    
 0.739
H3DIE0_TETNG
RF_PROK_I domain-containing protein.
      
 0.595
H3D341_TETNG
Inhibitory synaptic factor 1.
      
 0.534
CDH20
Cadherin 20; Cadherins are calcium-dependent cell adhesion proteins.
     
 0.460
H3C3F0_TETNG
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.455
H3DR37_TETNG
SLIT and NTRK-like family, member 3a.
    
 0.440
H3C773_TETNG
Uncharacterized protein.
    
 0.426
H3CUY8_TETNG
Wu:fc38h03.
     
 0.415
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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