H3BYQ3_TETNG protein (Tetraodon nigroviridis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

H3BYQ3_TETNG

Si:dkey-194e6.1. (216 aa)

Predicted Functional Partners:

H3DI25_TETNG

0.866

SLC6A20

0.815

H3CV15_TETNG

0.803

Q4SIS0_TETNG

0.803

H3BWP7_TETNG

0.474

Q4T1L5_TETNG

0.461

H3DN28_TETNG

0.443

H3D5E2_TETNG

0.428

H3BZV0_TETNG

0.419

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3BWP7_TETNG	H3BYQ3_TETNG	ENSTNIP00000000410	ENSTNIP00000001119	Tissue factor pathway inhibitor.	Si:dkey-194e6.1.	0.474
H3BYQ3_TETNG	H3BWP7_TETNG	ENSTNIP00000001119	ENSTNIP00000000410	Si:dkey-194e6.1.	Tissue factor pathway inhibitor.	0.474
H3BYQ3_TETNG	H3BZV0_TETNG	ENSTNIP00000001119	ENSTNIP00000001516	Si:dkey-194e6.1.	Uncharacterized protein.	0.419
H3BYQ3_TETNG	H3CV15_TETNG	ENSTNIP00000001119	ENSTNIP00000012099	Si:dkey-194e6.1.	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	0.803
H3BYQ3_TETNG	H3D5E2_TETNG	ENSTNIP00000001119	ENSTNIP00000015731	Si:dkey-194e6.1.	Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family.	0.428
H3BYQ3_TETNG	H3DI25_TETNG	ENSTNIP00000001119	ENSTNIP00000020169	Si:dkey-194e6.1.	SERPIN domain-containing protein; Belongs to the serpin family.	0.866
H3BYQ3_TETNG	H3DN28_TETNG	ENSTNIP00000001119	ENSTNIP00000021926	Si:dkey-194e6.1.	Heat shock protein 5; Belongs to the heat shock protein 70 family.	0.443
H3BYQ3_TETNG	Q4SIS0_TETNG	ENSTNIP00000001119	ENSTNIP00000012100	Si:dkey-194e6.1.	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	0.803
H3BYQ3_TETNG	Q4T1L5_TETNG	ENSTNIP00000001119	ENSTNIP00000007643	Si:dkey-194e6.1.	Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.	0.461
H3BYQ3_TETNG	SLC6A20	ENSTNIP00000001119	ENSTNIP00000014622	Si:dkey-194e6.1.	Solute carrier family 6 member 20.	0.815
H3BZV0_TETNG	H3BYQ3_TETNG	ENSTNIP00000001516	ENSTNIP00000001119	Uncharacterized protein.	Si:dkey-194e6.1.	0.419
H3BZV0_TETNG	Q4T1L5_TETNG	ENSTNIP00000001516	ENSTNIP00000007643	Uncharacterized protein.	Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.	0.675
H3CV15_TETNG	H3BYQ3_TETNG	ENSTNIP00000012099	ENSTNIP00000001119	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	Si:dkey-194e6.1.	0.803
H3D5E2_TETNG	H3BYQ3_TETNG	ENSTNIP00000015731	ENSTNIP00000001119	Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family.	Si:dkey-194e6.1.	0.428
H3D5E2_TETNG	H3DI25_TETNG	ENSTNIP00000015731	ENSTNIP00000020169	Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family.	SERPIN domain-containing protein; Belongs to the serpin family.	0.997
H3DI25_TETNG	H3BYQ3_TETNG	ENSTNIP00000020169	ENSTNIP00000001119	SERPIN domain-containing protein; Belongs to the serpin family.	Si:dkey-194e6.1.	0.866
H3DI25_TETNG	H3D5E2_TETNG	ENSTNIP00000020169	ENSTNIP00000015731	SERPIN domain-containing protein; Belongs to the serpin family.	Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family.	0.997
H3DN28_TETNG	H3BYQ3_TETNG	ENSTNIP00000021926	ENSTNIP00000001119	Heat shock protein 5; Belongs to the heat shock protein 70 family.	Si:dkey-194e6.1.	0.443
H3DN28_TETNG	Q4T1L5_TETNG	ENSTNIP00000021926	ENSTNIP00000007643	Heat shock protein 5; Belongs to the heat shock protein 70 family.	Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.	0.425
Q4SIS0_TETNG	H3BYQ3_TETNG	ENSTNIP00000012100	ENSTNIP00000001119	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	Si:dkey-194e6.1.	0.803