Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H3BYQ8_TETNGH15 domain-containing protein. (232 aa)    
Predicted Functional Partners:
H3CX16_TETNG
High mobility group box 1a.
    
 0.478
H3DFQ8_TETNG
High mobility group box 1b.
    
 0.478
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.432
H3DDW0_TETNG
Histone H2A; Belongs to the histone H2A family.
   
 
 0.432
H3CDG6_TETNG
SPT16 homolog, facilitates chromatin remodeling subunit.
    
 
 0.426
H3DCH0_TETNG
NOC2-like nucleolar associated transcriptional repressor.
    
   0.406
H3CF69_TETNG
H2A histone family, member Y2; Belongs to the histone H2A family.
   
 0.404
H3DFA2_TETNG
H2A histone family, member Y; Belongs to the histone H2A family.
   
 0.404
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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