Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
H3BYR2_TETNGTroponin T type 2a (cardiac). (296 aa)    
Predicted Functional Partners:
Q4TC84_TETNG
Chromosome undetermined SCAF7044, whole genome shotgun sequence.
   
 0.982
TNNC1
Chromosome 9 SCAF14729, whole genome shotgun sequence.
   
 0.982
H3BYP9_TETNG
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.956
H3CHP2_TETNG
Tropomyosin 2 (beta); Belongs to the tropomyosin family.
   
 0.956
TPM1
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.956
Q4RWQ5_TETNG
Chromosome 15 SCAF14981, whole genome shotgun sequence; Belongs to the tropomyosin family.
   
 0.956
H3DC43_TETNG
Troponin I type 1a (skeletal, slow).
  
 0.942
Q4SVI8_TETNG
Chromosome 18 SCAF13757, whole genome shotgun sequence; Belongs to the actin family.
   
 0.929
ACTA1
Chromosome 14 SCAF14723, whole genome shotgun sequence; Belongs to the actin family.
   
 0.929
ACTC1
Zgc:86709.
   
 0.929
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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