Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BYR8_TETNGDesmin a; Belongs to the intermediate filament family. (223 aa)    
Predicted Functional Partners:
H3D624_TETNG
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 
 0.741
H3DKY8_TETNG
Caspase 6, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.
    
 0.533
H3DP13_TETNG
Myelin basic protein b.
   
  
 0.469
H3C1N1_TETNG
Uncharacterized protein.
    
 0.433
Q4SRX3_TETNG
Chromosome 18 SCAF14485, whole genome shotgun sequence; Belongs to the peptidase C14A family.
    
 0.433
H3D7W3_TETNG
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.433
H3DNH9_TETNG
Caspase 7, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
    
 0.433
H3CZB5_TETNG
Uncharacterized protein.
    
 0.420
H3D131_TETNG
RNA binding protein fox-1 homolog 3; RNA-binding protein that regulates alternative splicing events.
   
 
 0.414
H3BVS2_TETNG
Titin-cap (telethonin).
   
 
 0.413
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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