Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H3BYS7_TETNGC3H1-type domain-containing protein. (502 aa)    
Predicted Functional Partners:
H3CQ87_TETNG
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.638
H3D9Q2_TETNG
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
 0.638
H3CBR6_TETNG
Pumilio RNA-binding family member 2.
    
   0.635
H3DHW2_TETNG
Pumilio RNA-binding family member 1.
    
   0.635
H3CRN0_TETNG
Leukocyte receptor cluster (LRC) member 8.
      
 0.509
H3CRN1_TETNG
CRIB domain-containing protein.
      
 0.509
H3DDT7_TETNG
F-box and WD repeat domain containing 8.
      
 0.508
H3DMY0_TETNG
Uncharacterized protein.
      
 0.508
H3CTE3_TETNG
Zgc:171482.
      
 0.504
H3DNE9_TETNG
Zinc finger, matrin-type 4b.
      
 0.504
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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