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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3BYT4_TETNGGeneral transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (472 aa)    
Predicted Functional Partners:
H3CG20_TETNG
General transcription factor IIH subunit.
   
 0.973
H3CM26_TETNG
General transcription factor IIH, polypeptide 1.
    
 0.973
H3DEF9_TETNG
General transcription factor IIH, polypeptide 3.
   
 0.973
Q4S6Y2_TETNG
Chromosome 14 SCAF14723, whole genome shotgun sequence.
    
 0.970
H3CIS0_TETNG
Excision repair cross-complementation group 3.
  
 0.964
H3DNR9_TETNG
Excision repair cross-complementation group 2.
    
 0.958
H3DIY7_TETNG
MNAT1 component of CDK activating kinase.
    
 0.957
Q4T5L9_TETNG
General transcription factor IIE, polypeptide 1, alpha.
   
 0.953
H3DDB5_TETNG
Cyclin H; Belongs to the cyclin family.
    
 0.947
H3D509_TETNG
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.946
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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