Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3BYT8_TETNGProtein tyrosine phosphatase 4A2b. (174 aa)    
Predicted Functional Partners:
RABGGTB
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
  0.864
H3CLM1_TETNG
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
  0.864
H3CKP4_TETNG
AUP1 lipid droplet regulating VLDL assembly factor.
    
   0.817
CNNM1
Cyclin and CBS domain divalent metal cation transport mediator 1.
    
 
 0.783
H3CWF8_TETNG
Fibronectin leucine rich transmembrane protein 2.
      
 0.612
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
      
 0.537
H3DJU0_TETNG
Rab geranylgeranyltransferase subunit alpha.
     
  0.534
H3CQ88_TETNG
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
     
  0.533
H3CLL9_TETNG
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
      
 0.509
H3DEL6_TETNG
Ubiquitin specific peptidase 30; Belongs to the peptidase C19 family.
      
 0.508
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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