Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BYU2_TETNGUncharacterized protein. (463 aa)    
Predicted Functional Partners:
H3DIG5_TETNG
Uncharacterized protein.
 
     0.916
H3DHB0_TETNG
Tetratricopeptide repeat domain 9C.
    
 0.587
H3D3X4_TETNG
Cell division cycle 40 homolog (S. cerevisiae).
    
 0.529
H3DG86_TETNG
Uncharacterized protein.
     
 0.524
H3CD67_TETNG
Cell division cycle 27.
    
 0.520
H3CCK6_TETNG
Sphingomyelin phosphodiesterase, acid-like 3A.
      
 0.509
H3CHD2_TETNG
Uncharacterized protein.
    
 0.502
H3CHD9_TETNG
Transmembrane protein 106Bb.
    
 0.401
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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