Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3BYU6_TETNGSET domain-containing protein. (666 aa)    
Predicted Functional Partners:
H3CC44_TETNG
SUZ12 polycomb repressive complex 2 subunit b.
   
 0.852
H3D135_TETNG
VEFS-Box domain-containing protein.
   
 0.852
H3CP64_TETNG
AE binding protein 2.
   
 0.819
AEBP2
AE binding protein 2.
   
 0.819
H3C730_TETNG
Embryonic ectoderm development.
   
 0.786
H3DLB6_TETNG
Ring finger protein 2.
    
 0.779
H3CG81_TETNG
Chromobox homolog 8b.
    
 0.759
H3DKW1_TETNG
Chromobox homolog 8a (Pc class homolog, Drosophila).
    
 0.759
YY1
YY1 transcription factor b.
   
 0.741
Q4RM50_TETNG
Chromosome 10 SCAF15019, whole genome shotgun sequence.
   
 0.741
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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