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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3BYU6_TETNGSET domain-containing protein. (666 aa)    
Predicted Functional Partners:
H3C730_TETNG
Embryonic ectoderm development.
    
 0.738
H3CC44_TETNG
SUZ12 polycomb repressive complex 2 subunit b.
   
 0.637
H3D135_TETNG
VEFS-Box domain-containing protein.
   
 0.637
RBBP7
Chromosome undetermined SCAF7762, whole genome shotgun sequence.
    
 0.603
H3DJC1_TETNG
Retinoblastoma binding protein 4.
    
 0.603
H3DAM4_TETNG
Lysine (K)-specific demethylase 6A, like.
   
 0.575
H3BXH8_TETNG
Uncharacterized protein.
   
 0.553
KDM6B
Lysine demethylase 6B.
   
 0.553
H3DR52_TETNG
Uncharacterized protein.
   
 0.553
H3CZL6_TETNG
Lysine (K)-specific demethylase 6B, b.
   
 0.550
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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